SANe is a seed-specific module-regulatory network designed to identify clusters of genes that tightly coexpress during the development of Arabidopsis seeds, as well as identify the Transcription Factors (TFs) that functionally regulate these clusters. This platform allows users to 1) explore modules of genes that expess highly in different seed compartments at distinct stages of development, 2) Upload a differentially expressed transcriptome (e.g. expression changes in a mutant genotype) to identify clusters that significantly perturb in the experiment and 3) query a TF of interest to gain insights into its putative regulatory mechanism.

Geneset Query

Cluster enrichment tool

[Upload a genome-wide differential expression profile ]

Q-value threshold 0.05 0.01 0.001


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Citation: bioRxiv preprint